IQ-TREE 2: New models and efficient methods for phylogenetic inference in the genomic era

IQ-TREE 2: New models and efficient methods for phylogenetic inference in the genomic era

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Abstract

IQ-TREE (http://www.iqtree.org) is a user-friendly and widely used software package for phylogenetic inference using maximum likelihood. Since the release of version 1 in 2014, we have continuously expanded IQ-TREE to integrate a plethora of new models of sequence evolution and efficient computational approaches of phylogenetic inference to deal with genomic data. Here, we describe notable features of IQ-TREE version 2 and highlight the key advantages over other software.

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Authors
  • Minh, Bui Quang
  • Schmidt, Heiko A.
  • Chernomor, Olga
  • Schrempf, Dominik
  • Woodhams, Michael
  • von Haeseler, Arndt
  • Lanfear, Robert
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Shortfacts
Category
 Journal Paper
Divisions
 Bioinformatics and Computational Biology
Journal or Publication Title
 bioRxiv Cold Spring Harbor Laboratory
ISSN
 none
Publisher
 Cold Spring Harbor Laboratory
Place of Publication
 New York
Number
 849372
Date
 21 November 2019
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