Items where Research Area is "Bioinformatics and Computational Biology" and Year is 2012

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Number of items: 28.

A

  • Modelling Translation Initiation under the Influence of sRNA
    Amman, Fabian and Flamm, Christoph and Hofacker, Ivo L. International Journal of Molecular Sciences, 13 (12). pp. 16223-16240 ISSN 1422-0067 (2012)

    • D

  • An Ant Colony Optimization for Finding Optimal Spaced Seeds in Biological Sequence Search
    Dinh, Huy Q. LNCS, 7461 (7461). pp. 204-211 ISSN 0302-9743 (2012)

  • Uncovering cis-regulatory sequence requirements for context specific transcription factor binding
    Dinh, Huy Q. Genome Res., 22. pp. 2018-2030 ISSN 1088-9051 (2012)

  • Advanced Methylome Analysis after Bisulfite Deep Sequencing: an Example in Arabidopsis.
    Dinh, Huy Q. and Sedlazeck, Fritz J. and von Haeseler, Arndt PLoS ONE, 7 (--). ISSN 1932-6203 (2012)

    • E

  • Pancrustacean phylogeny in the light of new phylogenomic data: support for Remipedia as the possible sister group of Hexapoda.
    Ebersberger, Ingo Mol. Biol. Evol., 29. pp. 1031-1045 ISSN 0737-4038 (2012)

  • The plant heat stress transcription factor (Hsf) family: structure, function and evolution
    Ebersberger, Ingo Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms, 1819 (2). pp. 104-119 ISSN 1874-9399 (2012)

  • A Consistent Backbone for the Fungi
    Ebersberger, Ingo and Von Haeseler, Arndt Mol.Biol. Evol., 29 (5). pp. 1319-1334 ISSN 0737-4038 (2012)

    • F

  • On the group theoretical background of assigning stepwise mutations onto phylogenies
    Fischer, Mareike and Nguyen, Minh Anh Thi and von Haeseler, Arndt Algorithms for Molecular Biologie, 7 (36). ISSN 1748-7188 (2012)

    • H

  • Symmetric Circular Matchings and RNA Folding
    Hofacker, Ivo L. and Reidys, Christian M. and Stadler, Peter F. Discrete Mathematics, 312 (1). 100-112 Elsevier (2012)

    • K

  • The Tetrahymena meiotic chromosome bouquet is organized by centromeres and promotes interhomolog recombination
    Köstler, Tina Journal of Cell Science, 125 (--). ISSN 0021-9533 (In Press) (2012)

  • Toward Community Standards in the Quest for Orthologs
    Köstler, Tina and Ebersberger, Ingo Bioinformatics, 29 (6). pp. 900-904 Oxford University Press (2012)

  • REvolver: Modeling sequence evolution under domain constraints
    Köstler, Tina and Von Haeseler, Arndt and Ebersberger, Ingo Mol. Biol. Evol, 29. pp. 2133-2145 ISSN 0737-4038 (2012)

    • L

  • RNA Folding Algorithms with G-Quadruplexes
    Lorenz, Ronny and Bernhart, Stephan H. and Externbrink, Fabian and Qin, Jing and Höner zu Siederdissen, Christian and Amman, Fabian and Hofacker, Ivo L. and Stadler, Peter F. In: Advances in Bioinformatics and Computational Biology. Lecture Notes in Computer Science , 7409 Springer, pp. 49-60 (2012)

  • Folding RNA/DNA hybrid duplexes
    Lorenz, Ronny and Hofacker, Ivo L. and Bernhart, Stephan H Bioinformatics, 28 (19). pp. 2530-2531 ISSN 1367-4803 (2012)

    • N

  • ImOSM: Intermittent Evolution and Robustness of Phylogenetic Methods
    Nguyen, Minh Anh Thi and Gesell, Tanja and von Haeseler, Arndt Mol. Biol. Evol., 29 (2). pp. 663-673 ISSN 0737-4038 (2012)

    • O

  • Diversity of nivicolous myxomycetes of the Teberda State Biosphere Reserve (Northwestern Caucasus, Russia)
    Okun, Mikhail V. Fungal Diversity, -- (--). ISSN 1560-2745 (In Press) (2012)

    • R

  • MASon: Million Alignments In Seconds - A Platform Independent Pairwise Sequence Alignment Library for Next Generation Sequencing Data.
    Rescheneder, Philipp and Sedlazeck, Fritz and von Haeseler, Arndt Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms (BIOINFORMATICS 2012) SciTePress, Setubal, Portugal (2012)

    • T

  • Epidermal growth factor facilitates melanoma lymph node metastasis by influencing tumor lymphangiogenesis
    Tauber, Stefanie Journal Of Investigative Dermatology, 133. pp. 230-238 Blackwell Publishing (2012)

  • MET expression in melanoma correlates with a lymphangiogenic phenotype
    Tauber, Stefanie Hum. Mol. Genet., 21. pp. 3387-3396 ISSN 0964-6909 (2012)

  • Wnt1 Is Anti-Lymphangiogenic in a Melanoma Mouse Model
    Tauber, Stefanie J. Invest. Dermatol., 132. pp. 2235-2244 ISSN 0022-202X (2012)

  • Adenosine deaminases that act on RNA induce reproducible changes in abundance and sequence of embryonic miRNAs
    Tauber, Stefanie and Sedlazeck, Fritz and von Haeseler, Arndt Genome Res., 22. pp. 1468-1476 ISSN 1088-9051 (2012)

  • DAGwoman: enabling DAGman-like workflows on non-Condor platforms. Proceedings of the 1st international workshop on Scalable Workflow Enactment Engines and Technologies
    Tschager, Thomas and Schmidt, Heiko A. In: 1st ACM SIGMOD Workshop on Scalable Workflow Execution Engines and Technologies (SWEET 2012) , 20.05.2012 , Scotsdale, AZ, USA (2012)

    • V

  • Do we still need supertrees?
    Von Haeseler, Arndt BMC Biol., 10 (13). ISSN 1741-7007 (2012)

  • TreeSnatcher plus: capturing phylogenetic trees from images
    Von Haeseler, Arndt BMC Bioinform., 13. p. 110 ISSN 1471-2105 (2012)

  • Identification of an ancient haemophilia A splice site mutation
    von Haeseler, Arndt Thromb. Res. (130). pp. 445-450 ISSN 0049-3848 (2012)

    • W

  • De novo design of a synthetic riboswitch that regulates transcription termination.
    Wachsmuth, Manja and Findeiß, Sven and Weissheimer, Nadine and Stadler, Peter F. and Mörl, Mario Nucleic Acids Research, upcom (upcom). Oxford University Press (2012)

  • RNA folding with soft constraints: reconciliation of probing data and thermodynamic secondary structure prediction
    Washietl, Stefan and Hofacker, Ivo L. and Stadler, Peter F. and Kellis, Manolis Nucleic Acids Research, 40 (10). pp. 4261-4272 ISSN 0305-1048 (2012)

  • LocARNA-P: Accurate boundary prediction and improved detection of structural RNAs
    Will, Sebastian and Joshi, Tejal and Hofacker, Ivo L. and Stadler, Peter F. and Backofen, Rolf RNA, 18 (5). pp. 900-914 ISSN 1355-8382 (2012)

    • This list was generated on Tue Nov 5 07:49:32 2024 CET.
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