Items where Research Area is "Bioinformatics and Computational Biology" and Year is 2013

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Number of items: 18.

  • The Trouble with Long-Range Base Pairs in RNA Folding
    Amman, Fabian and Bernhart, Stephan H. and Doose, Gero and Hofacker, Ivo L. and Qin, Jing and Stadler, Peter F. and Will, Sebastian In: Brazilian Symposium on Bioinformatics 2013 , 3-6 Nov 2013 , Recife, Brazil (2013)

  • Ultra-Fast Approximation for Phylogenetic Bootstrap
    Bui, Minh Q. and von Haeseler, Arndt Mol. Biol. Evol., 30 (5). pp. 1188-1195 ISSN 0737-4038 (2013)

  • Mapping the RNA-Seq trash bin: unusual transcripts in prokaryotic transcriptome sequencing data.
    Doose, Gero and Alexis, Maria and Kirsch, Rebecca and Findeiß, Sven and Langenberger, David and Machné, Rainer and Mörl, Mario and Hoffmann, Steve and Stadler, Peter F. RNA biology, 10 (7). pp. 1204-10 ISSN 1547-6286 (2013)

  • The evolution of the ribosome biogenesis pathway from a yeast perspective
    Ebersberger, Ingo and von Haeseler, Arndt and Schmitzberger, P. pp. 1509-1523 ISSN 1362-4962 Oxford Journals (2013)

  • CMCompare webserver: Comparing RNA Families via Covariance models
    Eggenhofer, Florian and Hofacker, Ivo L. and Höner zu Siederdissen, Christian Nucleic Acids Res., 41. W499-W503 ISSN 0305-1048 (2013)

  • Computational Design of RNAs with Complex Energy Landscapes
    Höner zu Siederdissen, Christian and Hammer, Stefan and Abfalter, Ingrid and Hofacker, Ivo L. and Flamm, Christoph and Stadler, Peter F. Biopolymers, 99. pp. 1124-1136 ISSN 0006-3525 (2013)

  • How to Multiply Dynamic Programming Algorithms
    Höner zu Siederdissen, Christian and Hofacker, Ivo L. and Stadler, Peter F. In: Brazilian Symposium on Bioinformatics 2013 , 3-6 Nov 2013 , Recife, Brazil (2013)

  • 2D meets 4G: G-Quadruplexes in RNA Secondary Structure Prediction
    Lorenz, Ronny and Bernhart, Stephan H. and Qin, Jing and Höner zu Siederdissen, Christian and Tanzer, Andrea and Amman, Fabian and Hofacker, Ivo L. and Stadler, Peter F. IEEE Trans. Comp. Biol. Bioinf., 10. pp. 832-844 ISSN 1557-9964 (2013)

  • Alterations of the Transcriptome of Sulfolobus acidocaldarius by Exoribonuclease aCPSF2
    Märtens, Birgit and Amman, Fabian and Manoharadas, Salim and Zeichen, Lukas and Orell, Alvaro and Albers, Sonja-Verena and Hofacker, Ivo L. and Bläsi, Udo PloS one, 8 (10). e76569 ISSN 1932-6203 (2013)

  • Identification of new protein coding sequences and signal peptidase cleavage sites of Helicobacter pylori strain 26695 by proteogenomics.
    Müller, Stephan A. and Findeiß, Sven and Pernitzsch, Sandy R. and Wissenbach, Dirk K. and Stadler, Peter F. and Hofacker, Ivo L. and von Bergen, Martin and Kalkhof, Stefan J Proteomics, 86. pp. 27-42 ISSN 1874-3919 (2013)

  • NGC: Lossless and Lossy Compression of Aligned High-throughput Sequencing Data
    Popitsch, Niko and von Haeseler, Arndt Nucleic Acids Res., 41 (1). e27 ISSN 0305-1048 (2013)

  • The RNAsnp Web Server: Predicting SNP effects on local RNA secondary structure
    Sabarinathan, Radhakrishnan and Tafer, Hakim and Seemann, Stefan and Hofacker, Ivo L. and Stadler, Peter F. and Gorodkin, Jan Nucleic Acids Res., 41. W475-W479 ISSN 0305-1048 (2013)

  • RNAsnp: Efficient detection of local RNA secondary structure changes induced by SNPs
    Sabarinathan, Radhakrishnan and Tafer, Hakim and Seemann, Stefan E. and Hofacker, Ivo L. and Stadler, Peter F. and Gorodkin, Jan Human Mutation, 34. 546-556 ISSN 1059-7794 (2013)

  • Benefit-of-doubt (BOD) scoring: a sequencing-based method for SNP candidate assessment from high to medium read number data sets
    Sedlazeck, Fritz J. and von Haeseler, Arndt Genomics, 101 (--). pp. 204-209 ISSN 1471-2164 (2013)

  • Epidermal growth factor facilitates melanoma lymph node metastasis by influencing tumor lymphangiogenesis
    Tauber, Stefanie Journal of Investigative Dermatology, 133 (--). pp. 230-238 ISSN 0022-202X (2013)

  • Automated identification of RNA 3D modules with discriminative power in RNA structural alignments
    Theis, Corinna and Höner zu Siederdissen, Christian and Hofacker, Ivo L. and Gorodkin, Jan Nucleic acids research, 41. pp. 9999-10009 ISSN 0305-1048 (2013)

  • De novo design of a synthetic riboswitch that regulates transcription termination.
    Wachsmuth, Manja and Findeiß, Sven and Weissheimer, Nadine and Stadler, Peter F and Mörl, Mario Nucleic acids research, 41 (4). pp. 2541-51 ISSN 0305-1048 (2013)

  • State-of the art methodologies dictate new standards for phylogenetic analysis
    von Haeseler, Arndt and Anisimova , Maria ISSN 1471-2148 (2013)

    • This list was generated on Tue Apr 16 16:16:17 2024 CEST.
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