Items where Research Area is "Bioinformatics and Computational Biology" and Year is 2018

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Number of items: 19.

A

  • Unifying the global phylogeny and environmental distribution of ammonia-oxidising archaea based on amoA genes
    Alves, Ricardo J. Eloy and Minh, Bui Quang and Urich, Tim and von Haeseler, Arndt and Schleper, Christa Nature Communications, 9 (1). ISSN 2041-1723 Springer Nature Publishing AG (2018)

  • A Generic Framework for Engineering Graph Canonization Algorithms
    Andersen, Jakob L. and Merkle, Daniel In: 2018 20th Workshop on Algorithm Engineering and Experiments (ALENEX) , January 7-8, 2018 , New Orleans, USA (2018)

    • B

  • Comparative RNA Genomics
    Backofen, Rolf and Gorodkin, Jan and Hofacker, Ivo L. and Stadler, Peter F. In: Comparative Genomics. Methods in Molecular Biology, 1704 Humana Press, pp. 363-400 ISBN 978-1-4939-7461-0 (2018)

    • D

  • Comparative genomics of Czech vaccine strains of Bordetella pertussis
    Dienstbier, Ana and Pouchnik, Derek and Wildung, Mark and Amman, Fabian and Hofacker, Ivo L. and Parkhill, Julian and Holubova, Jana and Sebo, Peter and Vecerek, Branislav Pathogens and Disease, 76 (7). Oxford University Press (2018)

    • E

  • CMV: visualization for RNA and protein family models and their comparisons
    Eggenhofer, Florian and Hofacker, Ivo L. and Backofen, Rolf and Höner zu Siederdissen, Christian Bioinformatics, 34 (15). pp. 2676-2678 ISSN 1367-4803 Oxford University Press (2018)

    • F

  • In silico design of ligand triggered RNA switches
    Findeiß, Sven and Hammer, Stefan and Wolfinger, Michael T. and Kühnl, Felix and Flamm, Christoph and Hofacker, Ivo L. Methods, 143. pp. 90-101 Elsevier (2018)

    • H

  • UFBoot2: Improving the Ultrafast Bootstrap Approximation
    Hoang, Diep Thi and Chernomor, Olga and von Haeseler, Arndt and Minh, Bui Quang and Vinh, Le Sy Molecular Biology and Evolution, 35 (2). pp. 518-522 ISSN 0737-4038 Oxford University Press (2018)

  • MPBoot: fast phylogenetic maximum parsimony tree inference and bootstrap approximation
    Hoang, Diep Thi and Vinh, Le Sy and Flouri, Tomáš and Stamatakis, Alexandros and von Haeseler, Arndt and Minh, Bui Quang BMC Evolutionary Biology, 18 (11). ISSN 1471-2148 Spinger Nature (2018)

    • M

  • SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis
    Muhar, Matthias and Ebert, Anna and Neumann, Tobias and Umkehrer, Christian and Jude, Julian Georg and Wieshofer, Corinna and Rescheneder, Philipp and Lipp, Jesse J. and Herzog, Veronika A. and Reichholf, Brian and Cisneros, David A. and Hoffmann, Thomas and Schlapansky, Moritz F. and Bhat, Pooja and von Haeseler, Arndt and Köcher, Thomas and Obenauf, Anna C. and Popow, Johann and Ameres, Stefan L. and Zuber, Johannes pp. 800-805 ISSN 0036-8075 American Association for the Advancement of Science (2018)

  • Germline Variants in the POT1-Gene in High-Risk Melanoma Patients in Austria
    Müller, Christoph and Krunic, Milica and Wendt, Judith and von Haeseler, Arndt and Okamoto, Ichiro G3: Genes|Genomes|Genetics, 8 (5). pp. 1475-1480 ISSN 2160-1836 The Genetics Society of America (GSA) (2018)

    • N

  • Complex rearrangements and oncogene amplifications revealed by long-read DNA and RNA sequencing of a breast cancer cell line
    Nattestad, Maria and Goodwin, Sara and Ng, Karen and Baslan, Timour and Sedlazeck, Fritz J. and Rescheneder, Philipp and Garvin, Tyler and Fang, Han and Gurtowski, James and Hutton, Elizabeth and Tseng, Elizabeth and Chin, Chen-Shan and Beck, Timothy and Sundaravadanam, Yogi and Kramer, Melissa and Antoniou, Eric and McPherson, John D. and Hicks, James and McCombie, W. Richard and Schatz, Michael C. Genome Research, 28 (8). pp. 1126-1135 ISSN 1088-9051 Cold Spring Harbor Laboratory Press (2018)

  • Complex Models of Sequence Evolution Require Accurate Estimators as Exemplified with the Invariable Site Plus Gamma Model
    Nguyen, Lam-Tung and von Haeseler, Arndt and Minh, Bui Quang Systematic Biology, 67 (3). pp. 552-558 ISSN 1063-5157 Oxford University Press (2018)

    • P

  • TRUmiCount: correctly counting absolute numbers of molecules using unique molecular identifiers
    Pflug, Florian G and von Haeseler, Arndt Bioinformatics, 34 (18). pp. 3137-3144 ISSN 1367-4803 Oxford University Press (2018)

    • S

  • Accurate detection of complex structural variations using single-molecule sequencing
    Sedlazeck, Fritz J. and Rescheneder, Philipp and Smolka, Moritz and Fang, Han and Nattestad, Maria and von Haeseler, Arndt and Schatz, Michael C. Nature Methods, 15 (6). pp. 461-468 ISSN 1548-7091 Nature Publishing Group (2018)

    • T

  • RNA modifications in structure prediction – Status quo and future challenges
    Tanzer, Andrea and Hofacker, Ivo L. and Lorenz, Ronny Methods. Elsevier (2018)

  • RNA Structure Elements Conserved between Mouse and 59 Other Vertebrates
    Thiel, Bernhard and Ochsenreiter, Roman and Gadekar, Veerendra and Tanzer, Andrea and Hofacker, Ivo L. Genes, 9 (8). p. 392 (2018)

    • U

  • In vivo insertion pool sequencing identifies virulence factors in a complex fungal–host interaction
    Uhse, Simon and Pflug, Florian G. and Stirnberg, Alexandra and Ehrlinger, Klaus and von Haeseler, Arndt and Djamei, Armin PLOS Biology, 16 (4). e2005129 ISSN 1544-9173 PLoS (2018)

    • W

  • Modeling Site Heterogeneity with Posterior Mean Site Frequency Profiles Accelerates Accurate Phylogenomic Estimation
    Wang, Huai-Chun and Minh, Bui Quang and Susko, Edward and Roger, Andrew J Systematic Biology, 67 (2). pp. 216-235 ISSN 1063-5157 Oxford University Press (2018)

  • Efficient computation of co-transcriptional RNA-ligand interaction dynamics
    Wolfinger, Michael T. and Flamm, Christoph and Hofacker, Ivo L. Methods, 143. pp. 70-76 Elsevier (2018)

    • This list was generated on Tue Nov 5 17:19:29 2024 CET.
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